Version 3.6

The documentation for PHYLIP version 3.6 is distributed in the form of web pages. The latest version

Here are other places where the PHYLIP 3.6 web pages (or 3.61, 3.62, etc.) also available on the web:

• The Environmental Genomics Thematic Programme Data Centre in Swindon, U.K.
• PHYLIP documentation is available on the web site of the BIRCH package by Brian Fristensky in the University of Calgary, Alberta, Canada. Some of it is also linked to from a web tutorial on molecular phylogeny there.

Version 3.5

Quite a few sites formerly made PHYLIP v3.5 documentation available in HTML form. Many have since upgraded to version 3.6. The remaining ones include:

• The Bioinformatics Resource at Stanford University.
• Instituto Oswaldo Cruz, Saõ Paulo, Brazil.
• The Bioinformatics Resource of the University of Hong Kong, China.
• Jun Ishikawa of the National Institute of Infectious Diseases, Japan.

Here is some documentation written by others, explaining the use of PHYLIP:

• Jarno Tuimala of the Center for Scientific Computing, Espoo, Finland, has written an excellent primer on the use of PHYLIP. It can be downloaded as a PDF.

Some sites were also bold enough to make PHYLIP available on a server basis -- you could submit jobs and they will analyze them and return the results. The ones I am currently aware of are these:

version 3.6

• The Bioinformatics Centre at the University of Wageningen, Netherlands, makes available a server for the DRAWTREE and DRAWGRAM programs.

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