... by type of data

• DNA sequences
• Protein sequences
• Restriction sites
• Distance matrices
• Gene frequencies
• Quantitative characters
• Discrete characters
• tree plotting, consensus trees, tree distances and tree manipulation

... by type of algorithm

• Heuristic tree search
• Branch-and-bound tree search
• Interactive tree manipulation
• Plotting trees, consenus trees, tree distances
• Converting data, making distances or bootstrap replicates

... to the PHYLIP home page